Set properties of the GeoModel object.
Source:R/models.R
setprops-GeoModel-character-numeric-numeric-method.RdSet properties of the GeoModel object.
Usage
# S4 method for class 'GeoModel,character,numeric,numeric'
setprops(x, aggregation, hdthreshold, linkthreshold)Arguments
- x
The GeoModel object.
- aggregation
Character. A value representing the spatial aggregation method used for aggregating the habitat availability map before conducting the sensitivity analysis. There are two aggregation methods available in geohabnet: sum and/or mean, either excludes NaNs during aggregation.
- hdthreshold
Numeric. A numeric value representing the threshold for habitat availability (e.g., cropland density or host density) used in the sensitivity analysis.
- linkthreshold
Numeric. A numeric value representing the threshold for the link weights used to calculate habitat connectivity of each location. Note that link weights indicate the relative likelihood of a species moving between locations (nodes) and correspond to the entries in the adjacency matrix.